{"id":16,"date":"2013-06-13T03:26:49","date_gmt":"2013-06-13T03:26:49","guid":{"rendered":"http:\/\/emilystephen.com\/?page_id=16"},"modified":"2025-07-30T15:38:33","modified_gmt":"2025-07-30T15:38:33","slug":"publications","status":"publish","type":"page","link":"https:\/\/emilystephen.com\/wordpress\/publications","title":{"rendered":"Publications"},"content":{"rendered":"<h1><strong style=\"color: #000000;\">Journal Articles<\/strong><\/h1>\n<ul>\n<li>Rauscher, B. C., Fomin-Thunemann, N., Kura, S., Doran, P. R., Perez, P. D., &#8230;, Bloniasz, P. F., &#8230;, Stephen, E. P., Thunemann, M., Boas, D., &amp; Devor, A. (in submission). Neurovascular Impulse Response Function (IRF) during spontaneous activity differentially reflects intrinsic neuromodulation across cortical regions. bioRxiv, 2024-09. <a href=\"https:\/\/doi.org\/10.1101\/2024.09.14.612514\">doi:10.1101\/2024.09.14.612514<\/a><\/li>\n<li>Hsin, W., Eden, U. T., Stephen, E. P. (in submission). Switching Models of Oscillatory Networks Improve Inference of Dynamic Functional Connectivity. Preprint. <a href=\"https:\/\/doi.org\/10.48550\/arXiv.2404.18854\">doi:10.48550\/arXiv.2404.18854<\/a><\/li>\n<li>Bloniasz, P. F., Oyama, S., &amp; Stephen, E. P. (2025). Filtered Point Processes Tractably Capture Rhythmic and Broadband Power Spectral Structure in Neural Electrophysiological Recordings. <em>Journal of Neural Engineering<\/em>. <a href=\"https:\/\/doi.org\/10.1088\/1741-2552\/ade28b\">doi:10.1088\/1741-2552\/ade28b<\/a><\/li>\n<li>Tomassi, N. E., Turshvili, D., Williams, A., Walsh, B., Stephen, E. P., Stepp, C. E. (2025). Investigating cognitive load and autonomic arousal during voice production and vocal auditory-motor adaptation. <em>Journal of Speech, Language, and Hearing Research<\/em>. <a href=\"https:\/\/doi.org\/10.1044\/2024_JSLHR-24-00601\">doi:10.1044\/2024_jslhr-24-00601<\/a><\/li>\n<li>Flores, F. J., Dalla Betta, I., Tauber, J., Schreier, D. R., Stephen, E. P., Wilson, M. A., &amp; Brown, E. N. (2024). Electrographic seizures during low-current thalamic deep brain stimulation in mice.\u00a0<em>Brain Stimulation<\/em>. <a href=\"https:\/\/doi.org\/10.1016\/j.brs.2024.08.002\">doi:10.1016\/j.brs.2024.08.002<\/a><\/li>\n<li>Tauber, J. M., Brincat, S. L., Stephen, E. P., Donoghue, J. A., Kozachkov, L., Brown, E. N., &amp; Miller, E. K. (2024). Propofol-mediated Unconsciousness Disrupts Progression of Sensory Signals through the Cortical Hierarchy. <em>Journal of Cognitive Neuroscience<\/em>, 1-20. <a href=\"https:\/\/doi.org\/10.1162\/jocn_a_02081\">doi:10.1162\/jocn_a_02081<\/a><\/li>\n<li>Stephen, E. P., Li, Y., Metzger, S., Oganian, Y., &amp; Chang, E. F. (2023). Latent neural dynamics encode temporal context in speech. <em>Hearing Research<\/em>, 108838. <a href=\"https:\/\/doi.org\/10.1016\/j.heares.2023.108838\">doi:10.1016\/j.heares.2023.108838<\/a><\/li>\n<li>Hsin, W. C., Eden, U. T., &amp; Stephen, E. P. (2022). Switching Functional Network Models of Oscillatory Brain Dynamics. In <i>2022 56th Asilomar Conference on Signals, Systems, and Computers<\/i> (pp. 607-612). IEEE. <a href=\"https:\/\/doi.org\/10.1109\/IEEECONF56349.2022.10052077\">doi.org\/10.1109\/IEEECONF56349.2022.10052077<\/a><\/li>\n<li>Weiner, V. S.*, Zhou, D. W.*, Kahali, P.*, Stephen, E. P., Peterfreund, R. A., Aglio, L. S., &#8230; &amp; Purdon, P. L. (2022). Propofol disrupts alpha dynamics in distinct thalamocortical networks underlying sensory and cognitive function during loss of consciousness.<em> PNAS<\/em>, 120 (11), e2207831120. <a href=\"https:\/\/doi.org\/10.1101\/2022.04.05.487190\">doi.org\/10.1073\/pnas.2207831120<\/a><a href=\"https:\/\/doi.org\/10.1101\/2022.04.05.487190\">.<\/a><\/li>\n<li>Denovellis, E.L., Myroshnychenko, M., Sarmashghi, M. and Stephen, E.P. (2022). Spectral Connectivity: a python package for computing multitaper spectral estimates and frequency-domain brain connectivity measures on the CPU and GPU. <i>Journal of Open Source Software<\/i>,\u00a0<i>7<\/i>(80), p.4840. <a href=\"https:\/\/doi.org\/10.21105\/joss.04840\">doi.org\/10.21105\/joss.04840<\/a><\/li>\n<li>Soulat, H., Stephen, E. P., Beck, A. M., &amp; Purdon, P. L. (2022). State space methods for phase amplitude coupling analysis.\u00a0<i>Scientific reports<\/i>,\u00a0<i>12<\/i>(1), 1-17. <a href=\"https:\/\/doi.org\/10.1038\/s41598-022-18475-3\">doi.org\/10.1038\/s41598-022-18475-3<\/a><\/li>\n<li>Stephen, E.P., Hotan, G.C., Pierce, E.T., Harrell, P.G., Walsh, J.L., Brown, E.N., Purdon, P.L. (2020). Broadband slow-wave modulation in posterior and anterior cortex tracks distinct states of propofol-induced unconsciousness. <em>Scientific Reports<\/em>, 10(1), 1-11. <a href=\"https:\/\/doi.org\/10.1038\/s41598-020-68756-y\">doi:10.1038\/s41598-020-68756-y<\/a><\/li>\n<li>Beck, A.M., Stephen, E.P., Purdon, P.L. (2018). State space oscillator models for neural data analysis. In Engineering in Medicine and Biology Society (EMBC), 2018 40th Annual International Conference of the IEEE. <a title=\"10.1109\/EMBC.2018.8513215\" href=\"https:\/\/doi.org\/10.1109\/EMBC.2018.8513215\" target=\"_blank\" rel=\"noopener\">doi:10.1109\/EMBC.2018.8513215<\/a><\/li>\n<li>Guidera, J.A., Taylor, N.E., Lee, J.T., Vlasov, K.Y., Pei, J., Stephen, E.P., Mayo, J.P., Brown, E.N., &amp; Solt, K. (2017). Sevoflurane induces coherent slow-delta oscillations in rats. <em>Frontiers in Neural Circuits<\/em>, 11:36. <a title=\"Sevoflurane induces coherent slow-delta oscillations in rats\" href=\"http:\/\/journal.frontiersin.org\/article\/10.3389\/fncir.2017.00036\/abstract\" target=\"_blank\" rel=\"noopener\">doi:<em id=\"__mceDel\">10.3389\/fncir.2017.00036<\/em><\/a><\/li>\n<li>Stephen, E.P., Lepage, K.Q., Eden, U.T., Brunner, P., Schalk, G., Brumberg, J.S, Guenther, F.H., Kramer, M.A. (2014). Assessing dynamics, spatial scale, and uncertainty in task-related brain network analyses. <em>Frontiers in Computational Neuroscience<\/em> 8:31.\u00a0<a title=\"Assessing dynamics, spatial scale, and uncertainty in task-related brain network analyses\" href=\"http:\/\/journal.frontiersin.org\/Journal\/10.3389\/fncom.2014.00031\/abstract\" target=\"_blank\" rel=\"noopener\">doi:<em id=\"__mceDel\">10.3389\/fncom.2014.00031<\/em><\/a><\/li>\n<\/ul>\n<h1><strong>Posters (*: Presented by)<\/strong><\/h1>\n<div>\n<ul>\n<li>Bloniasz, P. F., *Stephen, E. P. Common methods to decompose the power spectra of neural voltage recordings suffer from model misspecification, leading to misinterpretations. Florence, Italy: 34th Annual Computational Neuroscience Meeting (CNS*2025), 2025.<\/li>\n<li>*Bloniasz, P. F., Stephen, E. P. Statistical model misspecification in power spectral decomposition leads to practical inaccuracies in estimating properties of local field potentials. New York, NY: The 11th Workshop on Statistical Analysis of Neural Data (SAND), 2025.<\/li>\n<li>*Tauber, J., Stephen, E. P. Spiking global coherence estimation. New York, NY: The 11th Workshop on Statistical Analysis of Neural Data (SAND), 2025.<\/li>\n<li>*Umaguing, M. A. C., Bloniasz, P. F., Lee, E. K., Wang, T., Chandrasekaran, C., Stephen, E. P. Disentangling neuronal contributions to electrophysiological power spectra with filtered point processes. New York, NY: The 11th Workshop on Statistical Analysis of Neural Data (SAND), 2025.<\/li>\n<li>(Contributed Session) *Hsin, W., Eden, U. T., Stephen, E. P. Switching Functional Network Models of Oscillatory Brain Dynamics. New Haven: The 38th New England Statistics Symposium, 2025.<\/li>\n<li>*Bloniasz, P. F., Stephen, E. P. Modeling biophysically interpretable meso-scale latent dynamics with filtered point processes. Boston: 32nd Annual Meeting of the Cognitive Neuroscience Society, 2025.<\/li>\n<li>*Belisle, R.M., Stephen, E.P., &amp; Perrachione, T.K. Using neuroanatomical features to predict receptive language selectivity in middle frontal gyrus in individual brains. Boston: 32nd Annual Meeting of the Cognitive Neuroscience Society, 2025.<\/li>\n<li>*Bloniasz, P. F., Oyama, S., &amp; Stephen, E. P. <em>Filtered Point Processes Tractably Capture Rhythmic and Broadband Power Spectral Structure in Neural Electrophysiological Recordings<\/em>. Chicago: Society for Neuroscience, 2024.<\/li>\n<li>*Moore, A.A., Perrachione, T.K., &amp; Stephen, E.P. <em>Faster hemodynamic response latencies to speech in posterior superior temporal gyrus<\/em>. Chicago: Advances and Perspectives in Auditory Neuroscience XXII, 2024.<\/li>\n<li>*Bloniasz, P. F., Tauber, J., Brincat, S., Miller, E. K., Stephen, E. P. <em>Broadband coupling to slow wave phase during propofol-induced unconsciousness reflects both spiking and non-spiking dynamics at the cortical surface<\/em>. Washington, D.C.: Society for Neuroscience, 2023.<\/li>\n<li>(Nanosymposium) *Hsin, W., Eden, U. T., Stephen, E. P. <em>Switching Functional Network Models of Oscillatory Brain Dynamics<\/em>. Washington, D.C.: Society for Neuroscience, 2023.<\/li>\n<li>(Nanosymposium) *Hsin, W., Eden, U. T., Stephen, E. P. <em>Switching Functional Network Models of Multiple Rhythms During Anesthesia<\/em>. San Diego: Society for Neuroscience, 2022.<\/li>\n<li>Stephen, E. P., Li, Y., Metzger, S., Oganian, Y., Chang, E. F. <em>Multivariate temporal receptive fields in speech perception reflect low-dimensional dynamics<\/em>. Remote: COSYNE, 2021.<\/li>\n<li>Stephen, E. P., Hotan, G. C., Brown, E. N., Purdon, P. L. <em>Broadband slow wave modulation in posterior and anterior cortex tracks distinct states of propofol-induced unconsciousness<\/em>. Pittsburgh, PA: Statistical Analysis of Neural Data, 2019.<\/li>\n<li>E. P. Stephen, G. C. Hotan, S. Khan,\u00a0M. S. H\u00e4m\u00e4l\u00e4inen, E. N. Brown, P. L. Purdon. <em>Evidence that posterior and anterior phase-amplitude coupling distinguish unconsciousness from unarousability in propofol anesthesia<\/em>. San Diego: Society for Neuroscience, 2018.<\/li>\n<li>E. P. Stephen, M. S.\u00a0H\u00e4m\u00e4l\u00e4inen, S. Khan, E. T. Pierce, P. G. Harrell, J. L. Walsh, E. N. Brown, P. L. Purdon.\u00a0<em>Cortical networks under propofol anesthesia are fractured by spatiotemporally incoherent slow waves: A dimensionality analysis using EEG source localization<\/em>. Washington, D.C.: Society for Neuroscience, 2017.<\/li>\n<li>\n<div>E. P. Stephen, M. S.\u00a0H\u00e4m\u00e4l\u00e4inen, S. Khan, E. T. Pierce, P. G. Harrell, J. L. Walsh, E. N. Brown, P. L. Purdon.\u00a0<em>EEG source localization of human alpha rhythms under propofol anesthesia<\/em>. San Diego, CA: Society for Neuroscience, 2016.<\/div>\n<\/li>\n<li>Stephen, E.P., Lepage, K.Q., Eden, U.T., Brunner, P., Schalk, G., Brumberg, J.S, Guenther, F.H., Kramer, M.A. <i>Assessing dynamics, spatial scale, and uncertainty in task-related brain network analyses<\/i>. Program No. 679.27. San Diego, CA: Society for Neuroscience, 2013.<\/li>\n<li>Stephen, E.P., Lepage, K.Q., Eden, U.T., Brumberg, J.S, Guenther, F.H., Kramer, M.A. <i>Assessing dynamics, spatial scale, and uncertainty in task-related brain network analyses<\/i>. Boston, MA: Rhythmic Dynamics and Cognition Conference, 2013.<\/li>\n<li>Stephen, E.P., Kramer, M.A., Lepage, K.Q., Eden, U.T., Brunner, P., Guenther, F.H., Schalk, G., Brumberg, J.S. <i>Characterizing the dynamically evolving functional networks of speech<\/i>. Program No. 681.03. New Orleans, LA: Society for Neuroscience, 2012.<\/li>\n<li>Stephen, E.P., Ritt, J.T., Eden, U.T.\u00a0<i>Fitting dynamic models to extracellular recordings in mouse cortex during optogenetic stimulation<\/i>. Pittsburgh, PA:\u00a0Statistical Analysis of Neural Data, 2012.<\/li>\n<li>Stephen, E.P., Brumberg, J.S., Guenther, F.H. <i>Distinguishing imagined movement from rest using electroencephalography<\/i>. Program No. 711.05. Washington, D.C.: Society for Neuroscience, 2011.<\/li>\n<\/ul>\n<h1>Doctoral Dissertation<\/h1>\n<ul>\n<li>Stephen, E.P. (2015).\u00a0<em>Characterizing dynamically evolving functional networks in humans with application to speech<\/em>\u00a0(Doctoral Dissertation).\u00a0<a href=\"http:\/\/search.proquest.com\/docview\/1731940762\">[ProQuest Document ID No. 1731940762]<\/a>\u00a0<a href=\"http:\/\/emilystephen.com\/wordpress\/wp-content\/uploads\/2015\/12\/Stephen-Emily-U77339876_Final.pdf\">[PDF]<\/a><\/li>\n<\/ul>\n<h1><\/h1>\n<\/div>\n","protected":false},"excerpt":{"rendered":"<p>Journal Articles Rauscher, B. C., Fomin-Thunemann, N., Kura, S., Doran, P. R., Perez, P. D., &#8230;, Bloniasz, P. F., &#8230;, Stephen, E. P., Thunemann, M., Boas, D., &amp; Devor, A. (in submission). Neurovascular Impulse Response Function (IRF) during spontaneous activity &hellip; <a href=\"https:\/\/emilystephen.com\/wordpress\/publications\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":2,"featured_media":0,"parent":0,"menu_order":2,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"_links":{"self":[{"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/pages\/16"}],"collection":[{"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/comments?post=16"}],"version-history":[{"count":38,"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/pages\/16\/revisions"}],"predecessor-version":[{"id":235,"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/pages\/16\/revisions\/235"}],"wp:attachment":[{"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/media?parent=16"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}