{"id":28,"date":"2014-03-12T01:25:24","date_gmt":"2014-03-12T01:25:24","guid":{"rendered":"http:\/\/emilystephen.com\/?page_id=28"},"modified":"2025-07-30T15:42:35","modified_gmt":"2025-07-30T15:42:35","slug":"code","status":"publish","type":"page","link":"https:\/\/emilystephen.com\/wordpress\/code","title":{"rendered":"Code"},"content":{"rendered":"<h1>GitHub<\/h1>\n<p>Stephen Lab: <a href=\"https:\/\/github.com\/Stephen-Lab-BU\">https:\/\/github.com\/Stephen-Lab-BU<\/a><\/p>\n<p>See also: <a title=\"https:\/\/github.com\/emilyps14\" href=\"https:\/\/github.com\/emilyps14\" target=\"_blank\" rel=\"noopener\">https:\/\/github.com\/emilyps14<\/a><\/p>\n<ul>\n<li>Spatial cross-frequency coupling from <a title=\"Broadband slow-wave modulation in posterior and anterior cortex tracks distinct states of propofol-induced unconsciousness\" href=\"https:\/\/doi.org\/10.1038\/s41598-020-68756-y\">Stephen et al (2020)<\/a>:\u00a0<a href=\"https:\/\/github.com\/emilyps14\/propofol_spatial_pac\">propofol_spatial_pac<\/a><\/li>\n<li><a href=\"https:\/\/joss.theoj.org\/papers\/10.21105\/joss.04840\">Spectral Connectivity<\/a> (developed with Dr. Eric Denovellis): <a href=\"https:\/\/github.com\/Eden-Kramer-Lab\/spectral_connectivity\">spectral_connectivity<\/a><\/li>\n<li><a href=\"https:\/\/github.com\/NeurophysVis\/SpectraVis\">SpectraVis<\/a> (developed with Dr. Eric Denovellis)<\/li>\n<\/ul>\n<h1>Downloads<\/h1>\n<ul>\n<li>Simulations, networks, and figures from <a title=\"Assessing dynamics, spatial scale, and uncertainty in task-related brain network analyses\" href=\"http:\/\/journal.frontiersin.org\/Journal\/10.3389\/fncom.2014.00031\/abstract\" target=\"_blank\" rel=\"noopener\">Stephen et al, 2014<\/a>\u00a0(simulation results only):\u00a0<a href=\"http:\/\/emilystephen.com\/wordpress\/wp-content\/uploads\/2014\/03\/Stephen_etal_20141.zip\">Stephen_et al_2014 (65KB)<\/a>. The code includes the <a title=\"export_fig\" href=\"http:\/\/www.mathworks.com\/matlabcentral\/fileexchange\/23629-export-fig\" target=\"_blank\" rel=\"noopener\">export_fig<\/a> package to export pdf. This requires ghostscript, which can be downloaded <a title=\"Ghostscript\" href=\"http:\/\/www.ghostscript.com\/\" target=\"_blank\" rel=\"noopener\">here<\/a>.<a title=\"Stephen_etal_2014.zip (65KB)\" href=\"http:\/\/emilystephen.com\/wordpress\/wp-content\/uploads\/2014\/03\/Stephen_etal_2014.zip\"><br \/>\n<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>GitHub Stephen Lab: https:\/\/github.com\/Stephen-Lab-BU See also: https:\/\/github.com\/emilyps14 Spatial cross-frequency coupling from Stephen et al (2020):\u00a0propofol_spatial_pac Spectral Connectivity (developed with Dr. Eric Denovellis): spectral_connectivity SpectraVis (developed with Dr. Eric Denovellis) Downloads Simulations, networks, and figures from Stephen et al, 2014\u00a0(simulation results &hellip; <a href=\"https:\/\/emilystephen.com\/wordpress\/code\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":2,"featured_media":0,"parent":0,"menu_order":6,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"_links":{"self":[{"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/pages\/28"}],"collection":[{"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/comments?post=28"}],"version-history":[{"count":29,"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/pages\/28\/revisions"}],"predecessor-version":[{"id":238,"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/pages\/28\/revisions\/238"}],"wp:attachment":[{"href":"https:\/\/emilystephen.com\/wordpress\/wp-json\/wp\/v2\/media?parent=28"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}